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A B C D E F G H I L M N O P Q R S T U V W X

A

absorb(NodeList) - Method in class norsys.netica.Net: Deprecated. renamed to use absorbNodes for clarity.
absorbNodes(NodeList) - Method in class norsys.netica.Net: absorbNodes()node: absorbingabsorbing nodeslink: automatically addedremove nodesumming out a variablemaxing out a variableAbsorbs the passed nodes, so that they are removed from the net, but the net's overall joint probability distribution for the remaining nodes is unchanged.
addCases(DatabaseManager, double, NodeList, String, String, String, String) - Method in class norsys.netica.Caseset: addCases()degree of casesCaseset: in usefindings: getting from databasecase: getting from databaseDatabaseManager: making case-setCaseset: getting from databasedatabase: getting cases fromSELECT SQL commandSQL commands: SELECTaddCases: in useDatabaseManager: in useCaseset: in useDatabaseManager: in useLearner: in useLearner: in use EM_LEARNING: in uselearnCPTs: in useSearches the database attached to dbMgr for cases to add to this caseset.
addCases(Streamer, double, String) - Method in class norsys.netica.Caseset: addCases()degree of casescase file: readingCaseset: adding case file toStreamer: adding to case-setIndicates that all the cases within inStream should be added to this caseset.
addLink(Node) - Method in class norsys.netica.Node: addLink()link: addingadd parentparent nodes: adding toAdds a link from parentNode to this node, and returns the index of the added link.
addListener(NeticaListener) - Method in class norsys.netica.General: addListener()Adds the given listener to this object's list of listeners.
addListenerToAllComponents(EventListener) - Method in class norsys.netica.gui.NodePanel
addListenerToAllComponents(EventListener) - Method in interface norsys.netica.gui.RecursingEventListener: Add the given EventListener to this object and, if it is a Container, to all RecursingEventListeners it contains.
addListenerToAllComponents(EventListener) - Method in class norsys.netica.gui.NetPanel
addNodes(Net, String, String, String, String) - Method in class norsys.netica.DatabaseManager: addNodes()getAllNodesetsnode-set: retrieving allnode-set: ordering by prioritypriority order of node-setsorder of node-sets- in node-set namesdash in node-set namescase file: readingfavor_discrete, for nodes from DBfavor_continuous, for nodes from DB
addStates(int, String, int, double) - Method in class norsys.netica.Node: addStates()node: modifying statesstates: adding Adds one or more states to this node, inserting them into the existing states.
addToNodeset(String) - Method in class norsys.netica.Node: addToNodeset()sets of nodesnode-set: adding nodeAdds this node to the node-set named nodeset.

B

BELIEF_UPDATE - Static variable in class norsys.netica.Net: BELIEF_UPDATEBELIEF_UPDATEA form of autoUpdate.

C

calcState() - Method in class norsys.netica.Node: calcState()UNDEF_STATEnode: inferencedeterministic updatingequation: evaluatingReturns the discrete finding entered for this node if one has been entered, or the state calculated from its neighbors if that can be done deterministically (e.g., by equation or function table), or else UNDEF_STATE.
calcValue() - Method in class norsys.netica.Node: calcValue() UNDEF_DBLnode: inferencedeterministic updatingequation: evaluatingReturns the real-valued finding entered for this node if one has been entered, or the real value calculated from its neighbors if that can be done deterministically (e.g., by equation or function table), or else UNDEF_DBL.
Caseset - class norsys.netica.Caseset.: A collection of cases.
Caseset() - Constructor for class norsys.netica.Caseset: Caseset()Creates and returns a new Caseset, initially containing no cases, in the default environment, and with a name of null.
Caseset(String, Environ) - Constructor for class norsys.netica.Caseset: Caseset()case-sets: creatingsets of casesCaseset: creatingCreates and returns a new Caseset, initially containing no cases.
clear() - Method in class norsys.netica.Value: clear()Removes all the information kept regarding this value.
close() - Method in class norsys.netica.Streamer: Deprecated. use finalize instead.
compile() - Method in class norsys.netica.Net: compile()junction tree: creatingbelief updating: preparing fornet: compilingcompile netlink: automatically addedCompiles this net for fast belief updating (i.e., junction tree propagation).
COMPLETE_CHECK - Static variable in class norsys.netica.Environ: COMPLETE_CHECKCOMPLETE_CHECKThe most thorough argument checking level; use only for debugging.
CONSTANT_NODE - Static variable in class norsys.netica.Node: CONSTANT_NODECONSTANT_NODEThe value of this node is considered unchanging until the net is rebuilt.
CONTINUOUS_TYPE - Static variable in class norsys.netica.Node: CONTINUOUS_TYPECONTINUOUS_TYPENode is for a continuous (analog) variable.
continuousInfoJLabel - Variable in class norsys.netica.gui.NodePanel_BeliefBars: For continuous Nature nodes only, this is the label at the bottom of the display giving the real value of the node (see calcValue ).
continuousInfoJLabel - Variable in class norsys.netica.gui.NodePanel_BeliefBar: For continuous Nature nodes only, this is the label at the bottom of the display giving the real value of the node (see calcValue ).
copyNodes(NodeList) - Method in class norsys.netica.Net: copyNodes()net: transfering nodesdisconnected link: creatingcopy nodes or netnode: duplicatingDuplicates the nodes in nodeList, and puts the duplicates in this net.
COUNTING_LEARNING - Static variable in class norsys.netica.Learner: COUNTING_LEARNINGCOUNTING_LEARNINGIndicates the case counting learning algorithm.
CREATE_EVENT - Static variable in class norsys.netica.NeticaEvent: CREATE_EVENTCREATE_EVENTNot currently implemented.
createNodePanel(Node, int) - Static method in class norsys.netica.gui.NodePanel: Returns a NodePanel associated with node, of the given style.

D

DatabaseManager - class norsys.netica.DatabaseManager.: A resource for connecting to a database and importing case data or exporting findings to that database.
DatabaseManager(String, String, Environ) - Constructor for class norsys.netica.DatabaseManager: DatabaseManager()Microsoft AccessMicrosoft ExcelAccess, MicrosoftExcel, MicrosoftOracle databasemySQL databaseSQL Server databasetext file as databaseWindows ODBC Data Source Administratorconnection pooling for DBpooling, connection, for DBdatabase: connecting toODBC connection stringSQL connection stringconnection string for DBdatabase connectivityDatabaseManager: creatingDatabaseManager: in useDatabaseManager: in useexecuteSql: in useCreates and returns a new DatabaseManager object, which manages all interaction with a database.
DataDisplayer - interface norsys.netica.gui.DataDisplayer.: An interface that any object that displays Netica data should implement.
DECISION_NODE - Static variable in class norsys.netica.Node: DECISION_NODEDECISION_NODEThis node is for a variable that can be controlled by the agent (the "decision" node of an influence diagram).
defaultBackgroundColor - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The background color of this panel upon construction.
defaultBackgroundColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The background color of this panel upon construction.
defaultBackgroundColor - Static variable in class norsys.netica.gui.NetPanel: The background color of this NetPanel upon construction.
defaultBackgroundColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The background color of this panel upon construction.
defaultBackgroundColor - Static variable in class norsys.netica.gui.NodePanel_Text: The background color of this panel upon construction.
defaultBackgroundColor - Static variable in class norsys.netica.gui.NodePanel_Circle: The background color of this panel upon construction.
defaultBackgroundColor_ConstantNode - Static variable in class norsys.netica.gui.NodePanel: Background Color for newly constructed Constant nodes.
defaultBackgroundColor_DecisionNode - Static variable in class norsys.netica.gui.NodePanel: Background Color for newly constructed Decision nodes.
defaultBackgroundColor_NatureNode - Static variable in class norsys.netica.gui.NodePanel: Background Color for newly constructed Nature nodes.
defaultBackgroundColor_UtilityNode - Static variable in class norsys.netica.gui.NodePanel: Background Color for newly constructed Utility nodes.
defaultBbBarAreaColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The color of the belief bar region.
defaultBbBarAreaWidth - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: Width in pixels of the belief bar region.
defaultBbBarColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The color of the belief bars.
defaultBbBarHeight - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: Height in pixels of the belief bars.
defaultBbBarHeight - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: Height in pixels of the belief bars.
defaultBbBarsAreaColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The color of the belief bar region.
defaultBbBarsAreaWidth - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: Width in pixels of the belief bars region.
defaultBbBarsColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The color of the belief bars.
defaultBbItemHeight - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: Height in pixels of each belief bar row.
defaultBbItemHeight - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: Height in pixels of each belief bar row.
defaultBorder - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The javax.swing.border.Border surrounding the text.
defaultBorder - Static variable in class norsys.netica.gui.NodePanel_Text: The javax.swing.border.Border surrounding the text.
defaultBorderColor - Static variable in class norsys.netica.gui.NodePanel: The color of any border displayed by this panel upon construction.
defaultBorderColor - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The color of any border displayed by this panel.
defaultBorderColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The color of the border displayed by this panel upon construction.
defaultBorderColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The color of the border displayed by this panel upon construction.
defaultBorderColor - Static variable in class norsys.netica.gui.NodePanel_Circle: The color of the border displayed by this panel upon construction.
defaultFont - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The Font used for displaying the text in this panel.
defaultFont - Static variable in class norsys.netica.gui.NodePanel_BeliefBarsRow: The Font used for displaying the text in this panel.
defaultFont - Static variable in class norsys.netica.gui.NodePanel_BeliefBarRow: The Font used for displaying the text in this panel.
defaultFont - Static variable in class norsys.netica.gui.NodePanel_Text: The Font used for displaying the text in this panel.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel: The color of any foreground items, such as text.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The color used for displaying the text in this panel.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The color used for displaying the node title upon construction.
defaultForegroundColor - Static variable in class norsys.netica.gui.LinkGraphic: The color of this LinkGraphic upon construction.
defaultForegroundColor - Static variable in class norsys.netica.gui.NetPanel: The foreground color of this NetPanel upon construction.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBarsRow: The color used for displaying the text in this panel.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The color used for displaying the node title upon construction.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel_BeliefBarRow: The color used for displaying the text in this panel.
defaultForegroundColor - Static variable in class norsys.netica.gui.NodePanel_Text: The color used for displaying the text in this panel.
defaultHeight - Static variable in class norsys.netica.gui.NodePanel_Circle: Height in pixels of each circle/oval or hexagon.
defaultLineWidth - Static variable in class norsys.netica.gui.LinkGraphic: The width of this LinkGraphic upon construction.
defaultLinkColor - Static variable in class norsys.netica.gui.NetPanel: The color of any links drawn in this NetPanel.
defaultLinkPolicy - Static variable in class norsys.netica.gui.NetPanel: defaultLinkPolicy One of LINK_POLICY_NONE, LINK_POLICY_BELOW, or LINK_POLICY_ABOVE.
defaultLinkWidth - Static variable in class norsys.netica.gui.NetPanel: The width of the arrow shafts used in displaying links.
defaultRoundedCornerArcHeight - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The arc-height of the rounded rectangle box upon construction.
defaultRoundedCornerArcWidth - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The arc-width of the rounded rectangle box upon construction.
defaultStroke - Static variable in class norsys.netica.gui.LinkGraphic: The java.awt.Stroke used when initially constructing LinkGraphic objects.
defaultTextBorder - Static variable in class norsys.netica.gui.NodePanel_BeliefBarsRow: The Border around any text.
defaultTextBorder - Static variable in class norsys.netica.gui.NodePanel_BeliefBarRow: The Border around any text.
defaultTitleBorder - Static variable in class norsys.netica.gui.NodePanel: The Border around any title text.
defaultTitleBorder - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The javax.swing.border.Border object surrounding the node title upon construction.
defaultTitleBorder - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The javax.swing.border.Border object surrounding the node title upon construction.
defaultTitleFont - Static variable in class norsys.netica.gui.NodePanel: The Font of the title, if any.
defaultTitleFont - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The Font used for displaying the node title upon construction.
defaultTitleFont - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The Font used for displaying the node title upon construction.
defaultWidth - Static variable in class norsys.netica.gui.NodePanel_Circle: Width in pixels of each circle/oval or hexagon.
delete() - Method in class norsys.netica.Node: delete()remove nodenode: deletingRemoves this node from its net, and frees all resources (e.g., memory) it was using.
delete() - Method in class norsys.netica.Net: Deprecated. use finalize instead.
delete() - Method in class norsys.netica.State: delete()node: modifying statesstates: removingRemoves this state from its node, so that the node has one fewer state.
deleteLink(int) - Method in class norsys.netica.Node: deleteLink()link: deletingDelete the link entering this node from the given parent node.
deleteTables() - Method in class norsys.netica.Node: deleteTables()node: deleting tables tables: deletingCPT table: deletingfunction table: deletingexperience table: deletingDeletes this node's function table, its CPT table, and its experience table.
DISCONNECTED_NODE - Static variable in class norsys.netica.Node: DISCONNECTED_NODEDISCONNECTED_NODEThis node is just a placeholder for a disconnected link, to indicate the type of parent it requires.
DISCRETE_TYPE - Static variable in class norsys.netica.Node: DISCRETE_TYPEDISCRETE_TYPENode is for a discrete (digital) variable.
DISPLAY_MODE_GRAYED - Static variable in class norsys.netica.gui.NodePanel: Used to display this NodePanel as "grayed" or "inactive".
DISPLAY_MODE_GRAYED - Static variable in class norsys.netica.gui.LinkGraphic: Used to display this LinkGraphic as "grayed" or "inactive".
DISPLAY_MODE_HILITED - Static variable in class norsys.netica.gui.NodePanel: Used to display this NodePanel as having been specially selected.
DISPLAY_MODE_HILITED - Static variable in class norsys.netica.gui.LinkGraphic: Used to display this LinkGraphic as having been specially selected.
DISPLAY_MODE_NORMAL - Static variable in class norsys.netica.gui.NodePanel: Used to display this NodePanel in normal fashion.
DISPLAY_MODE_NORMAL - Static variable in class norsys.netica.gui.LinkGraphic: Used to display this LinkGraphic in normal fashion.
DUPLICATE_EVENT - Static variable in class norsys.netica.NeticaEvent: DUPLICATE_EVENTDUPLICATE_EVENTNot currently implemented.
duplicateNodes(NodeList) - Method in class norsys.netica.Net: Deprecated. use copyNodes instead.

E

EM_LEARNING - Static variable in class norsys.netica.Learner: EM_LEARNINGEM_LEARNINGIndicates the EM (Expectation Maximization) learning algorithm.
enterFinding(int) - Method in class norsys.netica.Node: Deprecated. use finding().enterState (stateIndex) instead.
enterFinding(String) - Method in class norsys.netica.Node: Deprecated. use finding().enterState (stateName) instead.
enterFindingNot(int) - Method in class norsys.netica.Node: Deprecated. use finding().enterStateNot (stateIndex) instead.
enterGaussian(double, double) - Method in class norsys.netica.Value: enterGaussian()finding: entering GaussianGaussian findingormal distribution findingEnters a likelihood finding for this Value object equivalent to a Gaussian distribution (normal distribution) with a mean of mean and a standard deviation of stddev.
enterInterval(double, double) - Method in class norsys.netica.Value: enterInterval()interval findingfinding: entering intervalEnters a likelihood finding for this Value object equivalent to an interval extending from low to high: [low, high].
enterLikelihood(float[]) - Method in class norsys.netica.Node: Deprecated. use finding().enterLikelihood (likelihood) instead.
enterLikelihood(float[]) - Method in class norsys.netica.Value: enterLikelihood()Declares that this discrete or discretized node's random variable abides by the given likelihood distribution.
enterReal(double) - Method in class norsys.netica.Value: enterReal()Declares that this continuous node has the exact value value.
enterState(int) - Method in class norsys.netica.Value: enterState()finding: enteringpositive finding: enteringDeclares that this discrete node is in the state whose index is stateIndex.
enterState(String) - Method in class norsys.netica.Value: enterState()Declares that this discrete node is in the state named stateName.
enterStateNot(int) - Method in class norsys.netica.Value: enterStateNot()finding: enteringnegative finding: enteringDeclares that this discrete or discretized node is not in the state with index stateIndex.
enterValue(double) - Method in class norsys.netica.Node: Deprecated. use finding().enterReal (value) instead.
ENTROPY_SENSV - Static variable in class norsys.netica.Sensitivity: ENTROPY_SENSVENTROPY_SENSVMeasure entropy or mutual information.
Environ - class norsys.netica.Environ.: The background environment for all Netica operations.
Environ(String) - Constructor for class norsys.netica.Environ: Environ()Environ: initializingConstructs an initialized Netica environment.
equationToTable(int, boolean, boolean) - Method in class norsys.netica.Node: equationToTable()node: equationcompile net: preparing fortables: building from equationequation: building tablegenerating table from equationBuilds the CPT for this node based on the equation that has been associated with it (see setEquation).
ERROR_ERR - Static variable in class norsys.netica.NeticaError: ERROR_ERRERROR_ERREvent occurred at "error" level - operation not properly finished, but no internal inconsistencies (e.g., user error, didn't finish process).
eventOccurred(NeticaEvent) - Method in class norsys.netica.General: eventOccurred()Netica calls back this method when an event occurred to an object we expressed interest in (by calling addListener).
eventOccurred(NeticaEvent) - Method in interface norsys.netica.NeticaListener: eventOccurred()A call-back method that Netica will call to indicate an event occurred.
eventOccurred(NeticaEvent) - Method in class norsys.netica.gui.NodePanel: A call-back method that Netica will call to indicate an event occurred.
eventOccurred(NeticaEvent) - Method in class norsys.netica.gui.NetPanel: A call-back method that Netica will call to indicate an event occurred.
EVERY_STATE - Static variable in class norsys.netica.Node: Deprecated. use State.EVERY_STATE
EVERY_STATE - Static variable in class norsys.netica.State: EVERY_STATEEVERY_STATEA "wildcard" state that matches all states of a node.
executeSql(String, String) - Method in class norsys.netica.DatabaseManager: executeSql()DatabaseManager: DB commandsdatabase: executing SQLSQL commands: arbitraryExecutes sqlCmd, an arbitrary SQL¹ command.

F

fadeCPTable(double) - Method in class norsys.netica.Node: fadeCPTable()tables: fadingCPT table: fadingSmoothes the conditional probabilities (CPT) of this node to indicate greater uncertainty, which accounts for the idea that the world may have changed a little since they were last learned.
finalize() - Method in class norsys.netica.NetTester: finalize()NetTester: deletingRemoves the NetTester object and frees all its resources (e.g., memory).
finalize() - Method in class norsys.netica.Node: finalize()Called by the garbage collector, when this node can no longer be referenced.
finalize() - Method in class norsys.netica.DatabaseManager: finalize()DatabaseManager: deletingRemoves this DatabaseManager from the system, and releases all the resources it uses (memory, connections, etc.).
finalize() - Method in class norsys.netica.Net: finalize()net: deletingRemoves this net from the system, and releases all resources it uses (e.g., frees memory), including all its substructures (e.g., nodes).
finalize() - Method in class norsys.netica.Caseset: finalize()Caseset: deletingRemoves the Caseset and frees all its resources (e.g., memory).
finalize() - Method in class norsys.netica.Sensitivity: finalize()Sensitivity: deletingFrees all resources this Sensitivity is using.
finalize() - Method in class norsys.netica.Streamer: finalize()Streamer: deletingReleases the resources (e.g., memory) used by this Streamer.
finalize() - Method in class norsys.netica.Learner: finalize()Learner: deletingRemoves the Learner object and frees all its resources (e.g., memory).
finalize() - Method in class norsys.netica.Environ: finalize()Environ: deletingending NeticaCloses down Netica and frees all its resources (e.g., memory).
finding() - Method in class norsys.netica.Node: finding()Returns the Value object holding this node's finding (aka, "evidence") information.
FIRST_CASE - Static variable in class norsys.netica.Net: FIRST_CASEFIRST_CASEPass this to read the first case.
flush() - Method in class norsys.netica.Streamer: flush()For a Streamer constructed from a java.io.OutputStream (see Streamer(OutputStream,String,Environ)), this will transfer the current contents of the Streamer to the the java.io.OutputStream.
FROM_DEVELOPER_CND - Static variable in class norsys.netica.NeticaError: FROM_DEVELOPER_CNDFROM_DEVELOPER_CNDYour program indicated the error.
FROM_WRAPPER_CND - Static variable in class norsys.netica.NeticaError: FROM_WRAPPER_CNDFROM_WRAPPER_CNDThe error did not occur within native Netica itself, but in the JAVA API wrapper layer.

G

GAUSSIAN_VALUE - Static variable in class norsys.netica.Value: GAUSSIAN_VALUEThis node's continuous random variable has a gaussian likelihood distribution.
General - class norsys.netica.General.: A class that provides generic useful documentation and utility information regarding a Netica object.
General() - Constructor for class norsys.netica.General
generateRandomCase(NodeList, int, double) - Method in class norsys.netica.Net: generateRandomCase()findings: generating randomsynthetic dataforward samplinglogic samplingrandom case: generationcase: generating randomsamplingsimulationGenerate a random case by simulation.
getAllNets(Environ) - Static method in class norsys.netica.Net: getAllNets()Retrieves from the given env a collection of all the Nets defined in that Environ.
getAllNodesets(boolean) - Method in class norsys.netica.Net: getAllNodesets()Returns a string which is a list of all node-sets defined for this net, separated by commas, in priority order, with highest priority first.
getArgumentChecking() - Method in class norsys.netica.Environ: getArgumentChecking()argument checkingReturns the current argument checking level, which is the degree to which Netica checks method call arguments.
getArrowHeadLength() - Method in class norsys.netica.gui.LinkGraphic: Gets the length of the arrow head.
getArrowHeadWidth() - Method in class norsys.netica.gui.LinkGraphic: Gets the width of the arrow head.
getAutoUpdate() - Method in class norsys.netica.Net: getAutoUpdate()net: auto-updatingauto-updating BELIEF_UPDATEReturns this net's current auto-updating value.
getBelief(String) - Method in class norsys.netica.Node: getBelief()Gets the belief that this node is in the given named state.
getBeliefs() - Method in class norsys.netica.Node: getBeliefs()probability (as float)node: inferencebelief updatingpropagating beliefsbeliefs: calculatingposterior probabilities: calculating Returns a belief vector indicating the current probability for each state of this node.
getBytes(String) - Method in class norsys.netica.User: getBytes()user defined fields: retrievingReturns the user-defined byte array associated with this fieldName, or null, if the field was never set.
getCaseFileDelimChar() - Method in class norsys.netica.Environ: getCaseFileDelimChar()Gets the character to use as a delimeter when creating case files.
getCenterPoint() - Method in class norsys.netica.gui.LinkGraphic: Gets the center point of the link.
getChildNodePanel() - Method in class norsys.netica.gui.LinkGraphic: Return the NodePanel that is nearest to the arrow end of this link.
getChildren() - Method in class norsys.netica.Node: getChildren()link: detectingnode: childrenchild nodes: retrievingReturns a list of the children of this node.
getComment() - Method in class norsys.netica.General: getComment()node: commentcomment: for node, net, or statenet: commentcomment: for netstate: commentcomment: for statedescriptive text for net, node, or stateGets the documentation text concerning this object.
getConfusion(Node, int, int) - Method in class norsys.netica.NetTester: getConfusion()predicted vs actualNetTester: confusion matrixconfusion matrixReturns the number of times the Net predicted predictedState for node, but the case file actually held actualState as the value of that node, during the performance test of a net.
getConstructorClass() - Static method in class norsys.netica.Node: getConstructorClass()Retrieves the classname of the class that Netica-J uses when constructing a Node.
getConstructorClass() - Static method in class norsys.netica.Net: getConstructorClass()Retrieves the classname of the class that Netica-J uses when automatically constructing new Nets.
getCPTable(float[]) - Method in class norsys.netica.Node: getCPTable()Retrieves the entire CPTable of this node as a 1-D array.
getCPTable(int[], float[]) - Method in class norsys.netica.Node: getCPTable()probability (as float)node: CPT tabletables: retrievingtables: conditional probabilityCPT table: retrievingReturns the conditional probabilities of this node, given that its parents are in the states indicated by the parentStates vector, by looking them up in the node's CPT table.
getCPTable(String, float[]) - Method in class norsys.netica.Node: getCPTable()This does the same as getCPTable(int[], float[]) except that it takes the parent states as a string rather than as an integer array.
getDefaultEnviron() - Static method in class norsys.netica.Environ: getDefaultEnviron()Returns the last created Environ.
getDisplayMode() - Method in class norsys.netica.gui.NodePanel: Returns whether the node is grayed, normal, or hi-lited.
getDisplayMode() - Method in class norsys.netica.gui.LinkGraphic: Returns whether the link is grayed, normal, or hi-lited.
getElimOrder() - Method in class norsys.netica.Net: getElimOrder()net: elimination orderelimination orderReturns a list of the nodes of this net in their "elimination order" (which is used for triangulation in the compilation of this net), or null if there is no order currently associated with this net.
getEndPoint() - Method in class norsys.netica.gui.LinkGraphic: Gets the endpoint (arrowhead end) of the link.
getEnviron() - Method in class norsys.netica.General: getEnviron()Returns the Environ this object belong's to.
getEnviron() - Method in class norsys.netica.DatabaseManager: getEnviron()Returns this DatabaseManager's Netica environment.
getEnviron() - Method in class norsys.netica.Caseset: getEnviron()Returns the Environ that this object belongs to.
getEnviron() - Method in class norsys.netica.Streamer: getEnviron()Returns this Streamer's environment.
getEnviron() - Method in class norsys.netica.Learner: getEnviron()Returns the Environ that this object belongs to.
getEquation() - Method in class norsys.netica.Node: getEquation()node: equationequation: retrievingReturns the equation associated with this node, or the empty string (rather than null), if this node does not have an equation.
getErrorRate(Node) - Method in class norsys.netica.NetTester: getErrorRate()NetTester: error rateerror rateReturns the accumulated "error rate" of node under the tests previously performed with test.
getExpectedUtils() - Method in class norsys.netica.Node: getExpectedUtils()expected utilityutility: retrieving expectedutility (as float)node: inferenceReturns a vector providing the expected utility of each choice in a decision node, considering findings currently entered.
getExpectedValue(double[]) - Method in class norsys.netica.Node: getExpectedValue()standard deviation UNDEF_DBLnode: inferenceexpected valueReturns the expected real value of this node, based on the current beliefs for this node, and if moments is non-null, moments will be filled with the moments as well.
getExperTable(int[], double[]) - Method in class norsys.netica.Node: getExperTable() UNDEF_DBLnode: experience tabletables: retrievingtables: experienceexperience table: retrievingnumber of casesestimated sample sizeessGiven parentStates, a vector of states for the parents of this node, this returns the "experience" of the node for the situation described by the parent states.
getFileName() - Method in class norsys.netica.Net: getFileName()net: file read fromfile name of netReturns the name of the file (including full path) that this net was last written to or read from.
getFileName() - Method in class norsys.netica.Streamer: getFileName()file name of streamerReturns the name of the file (including full path) that this stream was last written to or read from, if any.
getFinding() - Method in class norsys.netica.Node: Deprecated. use finding().getState() instead.
getFindingsProbability() - Method in class norsys.netica.Net: getFindingsProbability()net: probability of findingsjoint probability of findingsprobability of all findingscase: probability offindings: probability ofReturns the joint probability of the findings entered into net so far (including any negative or likelihood findings).
getIdNumber() - Method in class norsys.netica.NeticaError: getIdNumber()error reporting: getting ID numberReturns the error number identifying this error.
getIndex() - Method in class norsys.netica.State: getIndex()Returns the index number of this state.
getInputIndex(String) - Method in class norsys.netica.Node: getInputIndex()node: input namesReturns the link index number of the link whose name is linkName, or -1 if there isn't one with that name (case sensitive comparison).
getInputName(int) - Method in class norsys.netica.Node: getInputName()link: namenode: input namesinput names of nodeGets the name of this node's input (i.e., link) identified by the given index.
getJointProbability(NodeList, int[]) - Method in class norsys.netica.Net: getJointProbability()joint probabilityReturns the joint probability that each node in nodeList is in the corresponding state of nodeStates, given the findings currently entered in the Bayes net.
getKind() - Method in class norsys.netica.NeticaEvent: getKind()Returns what kind of event occurred.
getKind() - Method in class norsys.netica.Node: getKind()node kindnode: kindkind of nodedisconnected link: determining whether NATURE_NODE CONSTANT_NODE DECISION_NODE UTILITY_NODE DISCONNECTED_NODEReturns whether this node is a nature, decision, utility or constant node.
getKind() - Method in class norsys.netica.Value: getKind()node findings: determining kindREAL_VALUESTATE_VALUESTATE_NOT_VALUELIKELIHOOD_VALUEReturns the type of information we have on this node's value.
getLevels() - Method in class norsys.netica.Node: getLevels()level of discretized node (as double)node: levelsstates: levelsReturns the list of numbers used to enable a continuous node to act discrete, or enables a discrete node to provide real-valued numbers.
getLikelihood() - Method in class norsys.netica.Node: Deprecated. use finding().getLikelihood(null) instead.
getLikelihood(float[]) - Method in class norsys.netica.Value: getLikelihood()Returns as a likelihood vector the accumulated (likelihood and other) values entered for this discrete or discretized node.
getLinkGraphics() - Method in class norsys.netica.gui.NetPanel: Returns a collection of LinkGraphic objects, one for each link in the Net.
getLogLoss(Node) - Method in class norsys.netica.NetTester: getLogLoss()MOAC - mean over all casesNetTester: logarithmic losslogarithmic lossReturns the "logarithmic loss" of node under the tests previously performed with test.
getMaxIterations() - Method in class norsys.netica.Learner: getMaxIterations()Returns the maximum number of learning-step iterations for learnCPTs.
getMaxMemoryUsage() - Method in class norsys.netica.Environ: Deprecated. use getMemoryUsageLimit() instead.
getMaxTolerance() - Method in class norsys.netica.Learner: getMaxTolerance()Returns the tolerance for the minimum change in data log likelihood between consecutive passes through the data, as a termination condition for any learning to be done by learner.
getMemoryUsageLimit() - Method in class norsys.netica.Environ: getMemoryUsageLimit()Returns the current limit on memory that Netica is permitted to allocate for tables.
getMessage() - Method in class norsys.netica.NeticaError: getMessage()error reporting: getting descriptionReturns a message explaining the error.
getMessage() - Method in class norsys.netica.NeticaException: getMessage()Returns a formatted String detailing the nature of this exception and listing the NeticaErrors which are responsible for it.
getMethod() - Method in class norsys.netica.Learner: getMethod()Returns the algorithmic method used by this learner, one of COUNTING_LEARNING, EM_LEARNING, or GRADIENT_DESCENT_LEARNING.
getMissingDataChar() - Method in class norsys.netica.Environ: getMissingDataChar()Gets the character used to indicate missing data when creating case files.
getMostProbableConfig(NodeList) - Method in class norsys.netica.Net: getMostProbableConfig()net: most probable explanationMPEFinds the most probable configuration, also known as the most probable explanation (MPE), for all the nodes in the net.
getMutualInfo(Node) - Method in class norsys.netica.Sensitivity: getMutualInfo()self informationSensitivity: for mutual infoSensitivity: for entropymutual informationentropymutual informationentropy reductionMeasures the mutual information between two nodes, which is how much a finding at one node (called the "varying node") is expected to alter the beliefs (measured as decrease in its entropy) at another node (called the "query node").
getName() - Method in class norsys.netica.General: getName()net: namenode: namestate: namename: of netname: of nodename: of node statesReturns the identifer name of this object.
getNet() - Method in class norsys.netica.Node: getNet()node: net containingReturns the net that this node is part of.
getNet() - Method in class norsys.netica.NodeList: getNet()Returns the Net that this NodeList's nodes come from.
getNet() - Method in class norsys.netica.gui.NetPanel: Return the Net that this NetPanel represents.
getNeticaErrors() - Method in class norsys.netica.NeticaException: getNeticaErrors()Returns a collection of the NeticaError objects describing the faults that are responsible for this exception.
getNode() - Method in class norsys.netica.State: getNode()Returns the Node that this state belongs to.
getNode() - Method in class norsys.netica.Value: getNode()Returns the Node that this Value object applies to.
getNode() - Method in class norsys.netica.VisualNode: getNode()Returns the Node that this VisualNode represents.
getNode() - Method in class norsys.netica.gui.NodePanel: Returns the Node corresponding to this NodePanel.
getNode(int) - Method in class norsys.netica.NodeList: getNode()A convenience version of java.util.Vector.get(int), that returns a Node, rather than an Object, to save you from having to do the cast yourself.
getNode(String) - Method in class norsys.netica.Net: getNode()net: finding node by nameNodeList: finding node by namenode: finding by nameReturns the node of this net which has a name exactly matching name (case sensitive comparison).
getNodePanels() - Method in class norsys.netica.gui.NetPanel: Returns the list of NodePanels contained by this NetPanel.
getNodes() - Method in class norsys.netica.Net: getNodes()topological ordernet: getting nodesnodes in net: retrievingReturns a list of all the nodes in this net.
getNodesetColor(String) - Method in class norsys.netica.Net: getNodesetColor()Retrieves the color of nodeset in this net.
getNodesWithDisplayMode(int) - Method in class norsys.netica.gui.NetPanel: Returns the list of Nodes in this NetPanel that are in the display mode.
getNthFieldName(int) - Method in class norsys.netica.User: getNthFieldName()node: user defined fieldsnet: user defined fieldsuser field: enumerating allReturns the fieldName of the indexth user-defined named field; used for iterating through the fieldNames.
getNumber(String) - Method in class norsys.netica.User: getNumber()user defined fields: retrievingReturns the user-defined Number associated with this fieldName, or UNDEF_DBL, if the field was never set.
getNumeric() - Method in class norsys.netica.State: getNumeric()Returns the real value that has been previously associated with this discrete state (by calling setNumeric or Node.setLevels).
getNumStates() - Method in class norsys.netica.Node: getNumStates()node: statesstates: number ofReturns the number of states that this node can take on, or zero if this node is a continuous node that hasn't been discretized.
getObject() - Method in class norsys.netica.NeticaEvent: getObject()Returns the object that is associated with this event.
getObject(String) - Method in class norsys.netica.User: getObject()user defined fields: retrievingReturns the user-defined Object associated with this fieldName, or null, if the field was never set.
getParentNodePanel() - Method in class norsys.netica.gui.LinkGraphic: Return the NodePanel that is nearest to the start end of this link.
getParents() - Method in class norsys.netica.Node: getParents()link: detectingnode: parentsparent nodes: retrievingReturns a list of the parents of this node.
getPosition() - Method in class norsys.netica.VisualNode: getPosition()coordinates of nodelocation of nodecenter of nodenode: visual positionvisual appearance: position of nodeposition of nodeRetrieves as elements 0 and 1 respectively, the x,y coordinates of the center of this node, as it would appear in a visual display (e.g., in Netica Application).
getQuadraticLoss(Node) - Method in class norsys.netica.NetTester: getQuadraticLoss()MOAC - mean over all casesNetTester: quadratic lossquadratic lossBrier scoreReturns the "quadratic loss" of node under the tests previously performed.
getReal() - Method in class norsys.netica.Value: getReal()finding: retrievingpositive finding, real-valued: retrievingreal-valued finding: retrievingReturns the real-valued finding entered for this node, or UNDEF_DBL if none has been entered since the last retraction (call to clear).
getRealFuncTable(int[], double[]) - Method in class norsys.netica.Node: getRealFuncTable() UNDEF_DBLnode: function tabletables: retrievingtables: functionfunction table: retrievingGets the real value of this node as a function of its parent nodes.
getReference() - Method in class norsys.netica.User: getReference()net: user defined datanode: user defined datauser defined dataReturns a reference to information previously attached to this object using setReference, or null if none has been attached.
getRelatedNodes(NodeList, String) - Method in class norsys.netica.Node: getRelatedNodes()graph algorithmslink: connectivityd-separation algorithmancestor nodes: findingdescendent nodes: findingconnected nodes: findingMarkov blanket nodes: findingd-connected nodes: findingparent nodes: retrievingchild nodes: retrievingappend - lists of nodesunion - sets of nodesintersection - sets of nodessubtract - sets of nodesinclude_evidence_nodesexclude_selfFinds all the Nodes that bear the relationship relation with this node and puts them in relatedNodes.
getRelatedNodes(NodeList, String, NodeList) - Method in class norsys.netica.Net: getRelatedNodes()graph algorithmsFinds all the Nodes that bear the relationship relation with any member of nodeList and puts them in relatedNodes.
getSeverity() - Method in class norsys.netica.NeticaError: getSeverity()error severityerror reporting: getting severity of NOTHING_ERR REPORT_ERR NOTICE_ERR WARNING_ERR ERROR_ERR XXX_ERRseverity level of errorReturns the severity level of this error (one of NOTHING_ERR, REPORT_ERR, NOTICE_ERR, WARNING_ERR, ERROR_ERR, or XXX_ERR).
getStartPoint() - Method in class norsys.netica.gui.LinkGraphic: Gets the startpoint (non-arrowhead end) of the link.
getState() - Method in class norsys.netica.Value: getState()finding: retrievingpositive finding: retrievingGets the state finding entered for this (discrete or discretized) node.
getState() - Method in class norsys.netica.gui.NodePanel_BeliefBarsRow: NodePanel_BeliefBarsRow.getState().header
getState() - Method in class norsys.netica.gui.NodePanel_BeliefBarRow: NodePanel_BeliefBarRow.getState().header
getStateFuncTable(int[], int[]) - Method in class norsys.netica.Node: getStateFuncTable() UNDEF_STATEnode: function tabletables: retrievingtables: functionfunction table: retrievingGets the state value of this node as a function of its parent nodes.
getString(String) - Method in class norsys.netica.User: getString()user defined fields: retrievingReturns the user-defined String associated with this fieldName, or null, if the field was never set.
getStroke() - Method in class norsys.netica.gui.LinkGraphic: Returns the java.awt.Stroke used for drawing the line portion (body) of the link.
getStyle() - Method in class norsys.netica.VisualNode: getStyle()node: visual stylevisual appearance: style of nodestyle of nodeReturns the current "style descriptor" of this node for any visual display (e.g., in Netica Application, or within a NetPanel).
getStyle() - Method in class norsys.netica.gui.NodePanel: Returns the display style of this NodePanel.
getTitle() - Method in class norsys.netica.General: getTitle()net: titlenode: titlestate: titletitle of net, node, or stateGets the unrestricted label of this object.
getType() - Method in class norsys.netica.Node: getType()node typenode: typetype of nodediscretecontinuous DISCRETE_TYPE CONTINUOUS_TYPEReturns DISCRETE_TYPE if the variable corresponding to this node is discrete (digital), and CONTINUOUS_TYPE if it is continuous (analog).
getValueEntered() - Method in class norsys.netica.Node: Deprecated. use finding().getReal() instead.
getVarianceOfReal(Node) - Method in class norsys.netica.Sensitivity: getVarianceOfReal()expected value: sensitivityexpected decrease in variancevariance of a nodeSensitivity: for variancevariance reductionMeasures how much a finding at one node (called the "varying node") is expected to reduce the variance of another node (called the "query node").
getVersion() - Method in class norsys.netica.Environ: getVersion()Environ: getting version infoversion of NeticaReturns the version number of Netica, multiplied by 100.
getVersionString() - Method in class norsys.netica.Environ: getVersionString()Returns a String consisting of the full version number, a space, a code for the type of machine or OS it is running on, a comma, the name of the program, and finally a code indicating some build information (in parentheses).
getWarnings(int, Environ) - Static method in class norsys.netica.NeticaError: getWarnings()Returns a vector of all the NeticaErrors in env that are at the severity level severity or higher.
GRADIENT_DESCENT_LEARNING - Static variable in class norsys.netica.Learner: GRADIENT_DESCENT_LEARNINGGRADIENT_DESCENT_LEARNINGIndicates the Gradient Descent learning algorithm.
grayedModeBGColor - Static variable in class norsys.netica.gui.NodePanel: A color to use for signaling that this NodePanel is in "grayed out" mode ( see setDisplayMode(DISPLAY_MODE_GRAYED)).
grayedModeColor - Static variable in class norsys.netica.gui.LinkGraphic: A color to use for signaling that this LinkGraphic is in "grayed out" mode ( see setDisplayMode(DISPLAY_MODE_GRAYED)).

H

hasTable(boolean[]) - Method in class norsys.netica.Node: hasTable()CPT table: test if presentnode: tablestables: test if presentReturns true if this node has a function table or a CPT table, otherwise false.
hilitedModeBGColor - Static variable in class norsys.netica.gui.NodePanel: A color to use for signaling that this NodePanel is in "hilited" mode ( see setDisplayMode(DISPLAY_MODE_HILITED)).
hilitedModeColor - Static variable in class norsys.netica.gui.LinkGraphic: A color to use for signaling that this LinkGraphic is in "hilited" mode ( see setDisplayMode(DISPLAY_MODE_HILITED)).

I

IMPOSS_STATE - Static variable in class norsys.netica.Node: Deprecated. use State.IMPOSS_STATE
IMPOSS_STATE - Static variable in class norsys.netica.State: IMPOSS_STATEIMPOSS_STATEIndicates that the state value is irrelevant, because it is for a condition that will never occur.
INCONS_FINDING_CND - Static variable in class norsys.netica.NeticaError: INCONS_FINDING_CNDINCONS_FINDING_CNDAn inconsistent finding was entered into a Node.
INFINITY - Static variable in class norsys.netica.Environ: INFINITY INFINITYThe number used to represent an infinite numeric value; the negative of this number represents negative infinity.
insertFindings(NodeList, String, String, String) - Method in class norsys.netica.DatabaseManager: insertFindings()findings: putting in databasecase: putting in databaseDatabaseManager: filling DBdatabase: populating from findingsINSERT SQL commandSQL commands: INSERTDatabaseManager: in useDatabaseManager: in useinsertFindings: in useenterFindingNot: in useTakes the net's current findings and inserts them into the database.
INTERVAL_VALUE - Static variable in class norsys.netica.Value: INTERVAL_VALUEINTERVAL_VALUEThis node's continuous random variable is within a range of possible values.
isAscii(String) - Static method in class norsys.netica.Util: isAsciiReturns true, iff, the given string contains only ascii characters, that is, characters in the range 1..255, inclusive.
isBeliefUpdated() - Method in class norsys.netica.Node: isBeliefUpdated()updating: test if donebelief updating: test if donepropogation: test if doneWhether the beliefs for this node have already been calculated (by belief propagation).
isDeterministic() - Method in class norsys.netica.Node: isDeterministic()CPT table: test if deterministicnode: tablestables: test if deterministicfunction table: testdeterministic testWhether the value of this node, given its parents, is deterministic (versus probabilistic).
isInCategory(int) - Method in class norsys.netica.NeticaError: isInCategory()error condition (NeticaError)error reporting: getting category ofcategory of error OUT_OF_MEMORY_CND INCONS_FINDING_CND USER_ABORTED_CND FROM_DEVELOPER_CND FROM_WRAPPER_CNDReturns a boolean to indicate whether this error was caused by the condition errcnd.
isInNodeset(String) - Method in class norsys.netica.Node: isInNodeset()node-set: membership testingmembership in node-setReturns whether this node is a member of nodeset.
isNear(Point) - Method in class norsys.netica.gui.LinkGraphic: Returns true if point is within LINK_CLICK_DISTANCE_TOLERANCE pixels of the nearest point on this LinkGraphic.
isRelated(String, Node) - Method in class norsys.netica.Node: isRelated()graph algorithmsancestor nodes: testing fordescendent nodes: testing forconnected nodes: testing forMarkov blanket nodes: testing ford-connected nodes: testing forparent nodes: testing forchild nodes: testing forTests whether this node bears the relationship relation with otherNode.

L

learnCPTs(NodeList, Caseset, double) - Method in class norsys.netica.Learner: learnCPTs()degree of casescase-sets: learning fromback-propagation algorithmcase file: learning CPTs fromLearner: activatingCaseset: learning CPTs fromtables: learningCPT table: learninglearning algorithmscounting learningEM learninggradient descent learningPerforms learning of CPT tables from data.
Learner - class norsys.netica.Learner.: An object for managing batch-mode learning, such as EM or Gradient Descent learning, of CPTs from case data.
Learner(int) - Constructor for class norsys.netica.Learner: Learner()Creates and returns a new Learner object for use in learning of CPTs from case data, and associates it with the default Netica environment.
Learner(int, String, Environ) - Constructor for class norsys.netica.Learner: Learner()learning methodLearner: creatinglearning from data EM_LEARNING GRADIENT_DESCENT_LEARNING COUNTING_LEARNINGCreates and returns a new Learner object for use in learning of CPTs from case data, and associates it with a given Netica environment.
LIKELIHOOD_FINDING - Static variable in class norsys.netica.Node: Deprecated. use Value.LIKELIHOOD_VALUE instead.
LIKELIHOOD_VALUE - Static variable in class norsys.netica.Value: LIKELIHOOD_VALUELIKELIHOOD_VALUEThis (discrete or discretized) node's random variable abides by a likelihood distribution.
LINK_CLICK_DISTANCE_TOLERANCE - Static variable in class norsys.netica.gui.LinkGraphic: LINK_CLICK_DISTANCE_TOLERANCEControls the threshold used by isNear.
LINK_DEFAULT_ARROW_HEAD_LENGTH - Static variable in class norsys.netica.gui.LinkGraphic: Used to set the length of the triangle forming a link arrow's head.
LINK_DEFAULT_ARROW_HEAD_WIDTH - Static variable in class norsys.netica.gui.LinkGraphic: Used to set the width of the triangle forming a link arrow's head.
LINK_POLICY_ABOVE - Static variable in class norsys.netica.gui.NetPanel: LINK_POLICY_ABOVEDisplay the net's links, such that, should they overlap any NodePanels, the links appear above the nodes.
LINK_POLICY_BELOW - Static variable in class norsys.netica.gui.NetPanel: LINK_POLICY_BELOWDisplay the net's links, such that, should they overlap any NodePanels, the nodes appear above the links.
LINK_POLICY_NONE - Static variable in class norsys.netica.gui.NetPanel: LINK_POLICY_NONEDo not display the net's links.
LinkGraphic - class norsys.netica.gui.LinkGraphic.: A java.awt.Component for displaying a link (arrow) between two NodePanels.
LinkGraphic(Container, NodePanel, NodePanel) - Constructor for class norsys.netica.gui.LinkGraphic: public constructors

M

mapStateList(int[], NodeList, NodeList) - Static method in class norsys.netica.NodeList: mapStateList()NodeList: mapping state valuesReturns an array of states, the same states that are in the srcStates array, except in a different order.
MAX_STATES_DISPLAYED - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: A limit on the number of states that are displayed.
MAX_STATES_DISPLAYED - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: A limit on the number of states that are displayed.
maxWidth - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The maximum width in pixels of these panels.
maxWidth - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The maximum width in pixels of these panels.
maxWidth - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The maximum width in pixels of these panels.
minWidth - Static variable in class norsys.netica.gui.NodePanel_LabeledBox: The minimum width in pixels of these panels.
minWidth - Static variable in class norsys.netica.gui.NodePanel_BeliefBars: The minimum width in pixels of these panels.
minWidth - Static variable in class norsys.netica.gui.NodePanel_BeliefBar: The minimum width in pixels of these panels.
mouseClicked(MouseEvent) - Method in class norsys.netica.gui.LinkGraphic: Informs all listeners of the click (press and release) event, provided this LinkGraphic is enabled and the mouse was pressed sufficiently near to the link.
mouseEntered(MouseEvent) - Method in class norsys.netica.gui.LinkGraphic: Satisfies MouseListener interface; does nothing (has empty implementation body).
mouseExited(MouseEvent) - Method in class norsys.netica.gui.LinkGraphic: Satisfies MouseListener interface; does nothing (has empty implementation body).
mousePressed(MouseEvent) - Method in class norsys.netica.gui.LinkGraphic: Informs all listeners of the press event, provided this LinkGraphic is enabled and the mouse was pressed sufficiently near to the link.
mouseReleased(MouseEvent) - Method in class norsys.netica.gui.LinkGraphic: Informs all listeners of the release event, provided this LinkGraphic is enabled and the mouse was pressed sufficiently near to the link.
moveBy(int, int) - Method in class norsys.netica.gui.NodePanel: Move this panel by a fixed displacement.

N

NAME_MAX - Static variable in class norsys.netica.General: NAME_MAX NAME_MAXThe maximum number of characters in the name of a General Netica object (e.g., Node, Net, State).
NATURE_NODE - Static variable in class norsys.netica.Node: NATURE_NODENATURE_NODEThe value of this node is determined by nature (also known as a "chance" or "deterministic" node).
NEGATIVE_FINDING - Static variable in class norsys.netica.Node: Deprecated. use Value.STATE_NOT_VALUE instead.
Net - class norsys.netica.Net.: A Bayesian belief network or decision network.
Net() - Constructor for class norsys.netica.Net: Net()Creates and returns a new net, initially having no nodes, and places it in the current default Environ (see getDefaultEnviron).
Net(Environ) - Constructor for class norsys.netica.Net: Net()net: creating NAME_MAXname: of netCreates and returns a new net, initially having no nodes.
Net(Net, String, Environ, String) - Constructor for class norsys.netica.Net: Net() NAME_MAXname: of netcopy netduplicating a netnet: duplicatingNet copy-constructor.
Net(Streamer) - Constructor for class norsys.netica.Net: Net()Streamer: reading net fromnet: reading from fileReads a net from inStream, and returns the new net read, or throws a Netica Exception, if reading was impossible.
NeticaError - class norsys.netica.NeticaError.: A class that holds information on errors that occurred while Netica was attempting some operation (which become part of the NeticaException thrown), or on warnings or other status reports of successful Netica operations.
NeticaEvent - class norsys.netica.NeticaEvent.: Information describing an event which occurred within Netica.
NeticaException - exception norsys.netica.NeticaException.: A java.lang.Exception that holds extra information when Netica reports an error for some attempted operation.
NeticaException(int, String) - Constructor for class norsys.netica.NeticaException: NeticaException()Constructs a numbered NeticaException with the given error message.
NeticaException(String) - Constructor for class norsys.netica.NeticaException: NeticaException()Constructs a generic NeticaException with the given error message.
NeticaListener - interface norsys.netica.NeticaListener.: An interface that all classes which are to receive NeticaEvents must implement.
NetPanel - class norsys.netica.gui.NetPanel.: A javax.swing.JPanel for displaying a net.
NetPanel(Net, int) - Constructor for class norsys.netica.gui.NetPanel: Creates a new NetPanel for displaying the given net.
NetTester - class norsys.netica.NetTester.: A tool for grading a Bayes net by using a set of real cases to see how well the predictions or diagnosis of the net match the actual cases.
NetTester(NodeList, NodeList, int) - Constructor for class norsys.netica.NetTester: NetTester()grading a Bayes netprediction: testingdiagnosis: testingNetTester: creatingnet: testing performanceperformance testingtesting performance of netNetTester: in usetestWithCaseset: in usePrintConfusionMatrix: in usegetConfusion: in usegetErrorRate: in usegetLogLoss: in usefinalize: in useCreates a NetTester which is a tool for grading a Bayes net, using a set of real cases to see how well the predictions or diagnosis of the net match the actual cases.
NEXT_CASE - Static variable in class norsys.netica.Net: NEXT_CASENEXT_CASEPass this to read the case following the last case read.
NO_CHECK - Static variable in class norsys.netica.Environ: NO_CHECKNO_CHECKTurns off all argument checking.
NO_FINDING - Static variable in class norsys.netica.Node: Deprecated. use Value.NO_VALUE instead.
NO_MORE_CASES - Static variable in class norsys.netica.Net: NO_MORE_CASESNO_MORE_CASESReturned by Netica when trying to read past the last case.
NO_VALUE - Static variable in class norsys.netica.Value: NO_VALUENO_VALUEThere is no information on the range of values this node can adopt.
Node - class norsys.netica.Node.: A node (object which represents a variable) in a Net (Bayesian belief network or decision network).
NODE_STYLE_ABSENT - Static variable in class norsys.netica.gui.NodePanel: NODE_STYLE_ABSENTDisplay the node as empty space.
NODE_STYLE_AUTO_SELECT - Static variable in class norsys.netica.gui.NodePanel: NODE_STYLE_AUTO_SELECTDisplay the node using a style that seems appropriate.
NODE_STYLE_BELIEF_BARS - Static variable in class norsys.netica.gui.NodePanel: NODE_STYLE_BELIEF_BARSDisplay the node similar to the Belief Bars Style in Netica Application.
NODE_STYLE_CIRCLE - Static variable in class norsys.netica.gui.NodePanel: NODE_STYLE_CIRCLEDisplay the node as a circle or hexagon (Utility nodes).
NODE_STYLE_LABELED_BOX - Static variable in class norsys.netica.gui.NodePanel: NODE_STYLE_LABELED_BOXDisplay the node titles only, in rounded boxes.
NODE_STYLE_TEXT - Static variable in class norsys.netica.gui.NodePanel: NODE_STYLE_TEXTDisplay the node titles only.
Node() - Constructor for class norsys.netica.Node: Node()Default constructor - do not call this constructor directly.
Node(String, int, Net) - Constructor for class norsys.netica.Node: Node()net: adding nodes NAME_MAXnode: creatingdiscretecontinuousCreates and returns a new node for net.
Node(String, String, Net) - Constructor for class norsys.netica.Node: Node()Construct a node with the given name and state names, for the given Net.
NodeList - class norsys.netica.NodeList.: A java.util.Vector that is meant to store only Nodes from a single Net.
NodeList(Net) - Constructor for class norsys.netica.NodeList: NodeList()Constructs an empty NodeList of initial capacity 100.
NodeList(NodeList) - Constructor for class norsys.netica.NodeList: NodeList()Copy constructs a new NodeList from an existing NodeList.
NodePanel - class norsys.netica.gui.NodePanel.: An abstract base class used for constucting classes that are different styles of NodePanel.
NodePanel_BeliefBar - class norsys.netica.gui.NodePanel_BeliefBar.: A javax.swing.JPanel for displaying a Nature Node's Beliefs, or a Utility node's Expected Utilities.
NodePanel_BeliefBar(Node) - Constructor for class norsys.netica.gui.NodePanel_BeliefBar: NodePanel_BeliefBar.NodePanel_BeliefBar().header
NodePanel_BeliefBarRow - class norsys.netica.gui.NodePanel_BeliefBarRow.: A javax.swing.JPanel for displaying the state information in a NodePanel_BeliefBar.
NodePanel_BeliefBarRow(NodePanel_BeliefBar, State) - Constructor for class norsys.netica.gui.NodePanel_BeliefBarRow: NodePanel_BeliefBarRow.NodePanel_BeliefBarRow().header
NodePanel_BeliefBars - class norsys.netica.gui.NodePanel_BeliefBars.: A javax.swing.JPanel for displaying a Nature Node's Beliefs, or a Utility node's Expected Utilities.
NodePanel_BeliefBars(Node) - Constructor for class norsys.netica.gui.NodePanel_BeliefBars: NodePanel_BeliefBars.NodePanel_BeliefBars().header
NodePanel_BeliefBarsRow - class norsys.netica.gui.NodePanel_BeliefBarsRow.: A javax.swing.JPanel for displaying the state information in a NodePanel_BeliefBars.
NodePanel_BeliefBarsRow(NodePanel_BeliefBars, State) - Constructor for class norsys.netica.gui.NodePanel_BeliefBarsRow: NodePanel_BeliefBarsRow.NodePanel_BeliefBarsRow().header
NodePanel_Circle - class norsys.netica.gui.NodePanel_Circle.: A javax.swing.JPanel for displaying a Node as a simple geometric shape.
NodePanel_Circle(Node) - Constructor for class norsys.netica.gui.NodePanel_Circle: NodePanel_Circle.NodePanel_Circle().header
NodePanel_LabeledBox - class norsys.netica.gui.NodePanel_LabeledBox.: A javax.swing.JPanel for displaying a Node as its title in either a rounded rectangle (Nature nodes) or elongated hexagon (Utility nodes) (see Node.getKind).
NodePanel_LabeledBox(Node) - Constructor for class norsys.netica.gui.NodePanel_LabeledBox
NodePanel_Text - class norsys.netica.gui.NodePanel_Text.: A javax.swing.JPanel for displaying a Node by simply its title.
NodePanel_Text(Node) - Constructor for class norsys.netica.gui.NodePanel_Text
nodeTitleJLabel - Variable in class norsys.netica.gui.NodePanel: The title Component, if this NodePanel displays a title, otherwise null.
norsys.netica - package norsys.netica
norsys.netica.gui - package norsys.netica.gui
NOTHING_ERR - Static variable in class norsys.netica.NeticaError: NOTHING_ERRNOTHING_ERRNot anything.
NOTICE_ERR - Static variable in class norsys.netica.NeticaError: NOTICE_ERRNOTICE_ERRNotice of something unusual.

O

OUT_OF_MEMORY_CND - Static variable in class norsys.netica.NeticaError: OUT_OF_MEMORY_CNDOUT_OF_MEMORY_CNDSystem did not have enough memory to complete operation.

P

paint(Graphics) - Method in class norsys.netica.gui.LinkGraphic
paintComponent(Graphics) - Method in class norsys.netica.gui.NodePanel: Overrides javax.swing.JComponent.paintComponent().
paintComponent(Graphics) - Method in class norsys.netica.gui.NodePanel_LabeledBox
paintComponent(Graphics) - Method in class norsys.netica.gui.NodePanel_BeliefBars
paintComponent(Graphics) - Method in class norsys.netica.gui.NetPanel: Overrides javax.swing.JComponent.paintComponent() to draw link arrows on this JPanel.
paintComponent(Graphics) - Method in class norsys.netica.gui.NodePanel_BeliefBar
paintComponent(Graphics) - Method in class norsys.netica.gui.NodePanel_Circle